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combinetiff.exe  (MathWorks Inc)


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    MathWorks Inc combinetiff.exe
    Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using <t>CombineTIFF</t> software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.
    Combinetiff.Exe, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/combinetiff.exe/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    combinetiff.exe - by Bioz Stars, 2026-03
    90/100 stars

    Images

    1) Product Images from "A quantitative medium-throughput assay to measure Caenorhabditis elegans development and reproduction"

    Article Title: A quantitative medium-throughput assay to measure Caenorhabditis elegans development and reproduction

    Journal: STAR Protocols

    doi: 10.1016/j.xpro.2020.100224

    Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using CombineTIFF software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.
    Figure Legend Snippet: Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using CombineTIFF software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.

    Techniques Used: High Content Screening, Software


    Figure Legend Snippet:

    Techniques Used: Recombinant, Software, Fluorescence, Microscopy, High Content Screening



    Similar Products

    combinetiff.exe  (MathWorks Inc)
    90
    MathWorks Inc combinetiff.exe
    Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using <t>CombineTIFF</t> software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.
    Combinetiff.Exe, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/combinetiff.exe/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    combinetiff.exe - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using CombineTIFF software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.

    Journal: STAR Protocols

    Article Title: A quantitative medium-throughput assay to measure Caenorhabditis elegans development and reproduction

    doi: 10.1016/j.xpro.2020.100224

    Figure Lengend Snippet: Expected outcome of CellProfiler image analysis (A) Raw gray-scale image of a control well, recorded with the Opera Phenix high content screening system and merged using CombineTIFF software. Images are analyzed by open-source software CellProfiler. (B) Identification of the “Worm_4d” in a solvent control well (0.2% DMSO). Red number indicates worm area in pixel. (C) Identification of offspring (eggs + larvae) in a solvent control well (0.2% DMSO). Red numbers indicate the offspring count. (D) Example of a 4 μg/mL prochloraz treatment well containing a “Worm_4d_small”. Red number indicates worm area in pixel.

    Article Snippet: Find the software tool (CombineTIFF.exe) and the associated code (CombineTIFF.m) in Mendeley Data (folder: CombineTIFF_Software_and_Code). a) Install v.9.2 of the MATLAB Runtime on a Windows-based operating system. b) Start “CombineTIFF.exe” and choose the Harmony export directory including raw images and the XML file. c) Optionally give images a suffix, select the channel(s) and choose to merge images without overlap. d) If single tiles are missing in a well, choose to skip those wells. e) In the input folder, CombineTIFF generates a new folder named “combinedTIFFs” in which the merged images are stored along with an info TXT file.

    Techniques: High Content Screening, Software

    Journal: STAR Protocols

    Article Title: A quantitative medium-throughput assay to measure Caenorhabditis elegans development and reproduction

    doi: 10.1016/j.xpro.2020.100224

    Figure Lengend Snippet:

    Article Snippet: Find the software tool (CombineTIFF.exe) and the associated code (CombineTIFF.m) in Mendeley Data (folder: CombineTIFF_Software_and_Code). a) Install v.9.2 of the MATLAB Runtime on a Windows-based operating system. b) Start “CombineTIFF.exe” and choose the Harmony export directory including raw images and the XML file. c) Optionally give images a suffix, select the channel(s) and choose to merge images without overlap. d) If single tiles are missing in a well, choose to skip those wells. e) In the input folder, CombineTIFF generates a new folder named “combinedTIFFs” in which the merged images are stored along with an info TXT file.

    Techniques: Recombinant, Software, Fluorescence, Microscopy, High Content Screening